STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY37069.1KEGG: bfr:BF0145 hypothetical protein; SPTR: Putative uncharacterized protein. (522 aa)    
Predicted Functional Partners:
ADY37068.1
KEGG: bfr:BF0146 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.938
ADY37067.1
DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: bfr:BF0147 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Excisionase/Xis, DNA-binding; manually curated; TIGRFAM: DNA binding domain, excisionase family.
 
     0.934
ADY37066.1
KEGG: bfr:BF0149 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.883
ADY37065.1
DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: bfr:BF0150 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family.
 
     0.867
ADY37071.1
Domain of unknown function DUF1896; InterPro IPR015082; KEGG: bfr:BF0143 hypothetical protein; PFAM: Protein of unknown function DUF1896; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1896).
 
     0.856
ADY37072.1
Helicase domain protein; COGs: COG4646 DNA methylase; InterPro IPR014001:IPR001650; KEGG: bfr:BF0142 putative DNA methylase; PFAM: Helicase, C-terminal; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: Putative uncharacterized protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
 
   
 0.840
ADY37070.1
DNA topoisomerase III; COGs: COG0550 Topoisomerase IA; InterPro IPR005738:IPR006171:IPR003601:IPR003602:IPR013497; KEGG: bfr:BF0144 Exc protein; PFAM: DNA topoisomerase, type IA, central; Toprim domain; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; SPTR: DNA topoisomerase I; TIGRFAM: DNA topoisomerase III, bacterial-type; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid.
 
 
 
 0.804
ADY37099.1
KEGG: bfr:BF0113 hypothetical protein; SPTR: TraQ.
  
    0.778
ADY37077.1
Tetracycline regulation of excision, RteC; InterPro IPR018534; KEGG: bfr:BF0136 tetracycline resistance element mobilization regulatory protein RteC; PFAM: Tetracycline regulation of excision, RteC; SPTR: Putative uncharacterized protein; PFAM: RteC protein.
 
     0.775
ADY37095.1
InterPro IPR022187; KEGG: bfr:BF0117 hypothetical protein; SPTR: TraM; TIGRFAM: Conjugative transposon, TraM; PFAM: Protein of unknown function (DUF3714); TIGRFAM: Bacteroides conjugative transposon TraM protein.
 
     0.775
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.