STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY37467.13-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023; KEGG: bvu:BVU_2497 putative hydrolase; SPTR: Putative uncharacterized protein; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA. (172 aa)    
Predicted Functional Partners:
ADY34686.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023; KEGG: fnu:FN0213 N-acylneuraminate-9-phosphatase; SPTR: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; manually curated; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA.
  
  
 
0.918
ADY37466.1
Domain of unknown function DUF2520-containing protein; COGs: COG5495 conserved hypothetical protein; InterPro IPR004455:IPR018931; KEGG: bvu:BVU_2496 hypothetical protein; PFAM: Domain of unknown function DUF2520; NADP oxidoreductase, coenzyme F420-dependent; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2520); NADP oxidoreductase coenzyme F420-dependent.
       0.845
ADY37465.1
KEGG: bvu:BVU_2495 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.833
ADY37464.1
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: bvu:BVU_2494 putative NADH dehydrogenase/NAD(P)H nitroreductase; PFAM: Nitroreductase-like; SPTR: Putative uncharacterized protein; PFAM: Nitroreductase family.
       0.823
ADY37468.1
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.703
ADY34688.1
Acylneuraminate cytidylyltransferase; COGs: COG1083 CMP-N-acetylneuraminic acid synthetase; InterPro IPR003329; KEGG: pru:PRU_0447 hypothetical protein; PFAM: Acylneuraminate cytidylyltransferase; SPTR: HAD-superfamily hydrolase subfamily IA; PFAM: Cytidylyltransferase.
 
 
   0.629
ADY37991.1
COGs: COG2089 Sialic acid synthase; InterPro IPR013132; KEGG: pca:Pcar_1277 sialic acid synthase; PFAM: N-acetylneuraminic acid synthase, N-terminal; PRIAM: N-acetylneuraminate synthase; SPTR: N-acylneuraminate-9-phosphate synthase; PFAM: NeuB family.
   
 0.587
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
   
 0.510
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
  
 0.480
ADY36062.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
   
 0.456
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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