STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY37568.1Protein of unknown function DUF45; COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: bvu:BVU_1342 hypothetical protein; PFAM: Protein of unknown function DUF45; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF45. (250 aa)    
Predicted Functional Partners:
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.598
ADY37566.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: bfs:BF0198 putative extracytoplasmic function alternative sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma-70; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.547
ADY37567.1
KEGG: bvu:BVU_1340 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.547
ADY37569.1
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: bvu:BVU_1351 MFS transport protein AraJ; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein; PFAM: Major Facilitator Superfamily.
       0.486
hisB
COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807:IPR005954:IPR006543:IPR006549; KEGG: bth:BT_0203 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: Imidazoleglycerol-phosphate dehydratase; PRIAM: Histidinol-phosphatase; SPTR: Putative uncharacterized protein; TIGRFAM: Histidinol-phosphatase; Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphat [...]
   
   0.468
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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