STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY37969.1Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: bvu:BVU_2940 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; Belongs to the 'phage' integrase family. (405 aa)    
Predicted Functional Partners:
ADY36702.1
Integrase family protein; InterPro IPR002104; KEGG: bth:BT_2990 hypothetical protein; PFAM: Integrase, catalytic core, phage; SPTR: Putative uncharacterized protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.681
ADY35890.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bvu:BVU_2037 hypothetical protein; PFAM: Outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
  
     0.542
ADY37968.1
KEGG: bvu:BVU_1573 glycoside hydrolase family protein; SPTR: Putative uncharacterized protein.
  
    0.522
ADY37967.1
Putative mobilization protein; COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: bfr:BF2815 putative mobilization protein; SPTR: Putative mobilization protein; PFAM: TraG/TraD family.
       0.511
ADY37021.1
DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: zpr:ZPR_1827 putative excisionase; SPTR: Putative uncharacterized protein; TIGRFAM: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family.
  
     0.503
ADY34789.1
KEGG: pru:PRU_1115 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.485
ADY35595.1
KEGG: bth:BT_2660 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3575).
  
     0.478
ADY37413.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: bvu:BVU_0834 hypothetical protein; PFAM: TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein.
  
     0.478
ADY36043.1
KEGG: bth:BT_2660 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3575).
  
     0.456
ADY35195.1
KEGG: bth:BT_2660 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3575).
  
     0.454
Your Current Organism:
Bacteroides salanitronis
NCBI taxonomy Id: 667015
Other names: B. salanitronis DSM 18170, Bacteroides salanitronis BL78, Bacteroides salanitronis DSM 18170, Bacteroides salanitronis JCM 13657, Bacteroides salanitronis str. DSM 18170, Bacteroides salanitronis strain DSM 18170
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