STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livH2Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. (304 aa)    
Predicted Functional Partners:
braE2
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
livG4
Unannotated protein.
 
 0.992
GCA_000827775_04096
Unannotated protein.
 
 
 0.990
braG2
Unannotated protein.
 
 
 0.978
braC2
Unannotated protein.
 
 
 0.976
braF
Unannotated protein.
 
 0.958
livG3
Unannotated protein.
 
 0.957
livK2
Unannotated protein.
 
 
 0.936
livJ
Unannotated protein.
 
 
 0.936
livK
Unannotated protein.
 
 
 0.936
Your Current Organism:
Klebsiella pneumoniae rhinoscleromatis
NCBI taxonomy Id: 667127
Other names: K. pneumoniae subsp. rhinoscleromatis ATCC 13884, Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884, Klebsiella pneumoniae subsp. rhinoscleromatis str. ATCC 13884, Klebsiella pneumoniae subsp. rhinoscleromatis strain ATCC 13884
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