STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C8TAZ1_KLEPRUnannotated protein. (623 aa)    
Predicted Functional Partners:
C8T7G3_KLEPR
Unannotated protein.
  
 
  0.999
C8SYQ0_KLEPR
Unannotated protein.
    
  0.999
dnaB
Unannotated protein.
  
 0.979
dnaB-2
Unannotated protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 0.979
dnaB-3
Unannotated protein.
  
 0.979
priB
Unannotated protein; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
   
 
 0.976
priA
Unannotated protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
     
 0.969
C8T0D5_KLEPR
Unannotated protein.
 
  
0.951
C8TAZ2_KLEPR
Unannotated protein.
 
 
 0.938
rph
Unannotated protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
    
 0.931
Your Current Organism:
Klebsiella pneumoniae rhinoscleromatis
NCBI taxonomy Id: 667127
Other names: K. pneumoniae subsp. rhinoscleromatis ATCC 13884, Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884, Klebsiella pneumoniae subsp. rhinoscleromatis str. ATCC 13884, Klebsiella pneumoniae subsp. rhinoscleromatis strain ATCC 13884
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