STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX51346.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
treP
PTS system trehalose-specific IIBC component; COG: COG1263; Pfam: PF00367,PF02378; InterPro: IPR011296.
  
 
 0.579
ptsG
PTS system, glucose-like IIB component; COG: COG1263; Pfam: PF02378,PF00367; InterPro: IPR003352.
  
 
 0.579
nagE
PTS system, N-acetylglucosamine-specific IIBC component; COG: COG1263; Pfam: PF02378,PF00367; InterPro: IPR010974.
  
 
 0.579
scrA
PTS system sucrose-specific IIBC component; COG: COG1263; Pfam: PF00367,PF02378; InterPro: IPR010973.
  
 
 0.579
murP
N-acetylmuramic acid phosphotransfer permease; COG: COG1263; Pfam: PF00367,PF02378; InterPro: IPR003352.
  
 
 0.579
FruB
Hypothetical protein; 2.7.1.-.
  
 
 0.557
YqaB
Beta-phosphoglucomutase family hydrolase; COG: COG0637; Pfam: PF00702; InterPro: IPR005834.
       0.548
UlaA
PTS system, Lactose/Cellobiose specific IIB subunit; COG: COG3037; Pfam: PF04215,PF02302; InterPro: IPR007333.
  
  
 0.508
YqaA
Hypothetical protein; COG: COG1238.
       0.490
ptbA
PTS system, glucose subfamily, IIA component; COG: COG2190; Pfam: PF00358; InterPro: IPR001127.
   
 
 0.460
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.