STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhsARHS repeat-associated core domain protein; COG: COG3209. (142 aa)    
Predicted Functional Partners:
EEX51413.1
Hypothetical protein.
      0.928
EEX51414.1
Hypothetical protein.
       0.741
EEX51411.1
Hypothetical protein.
       0.543
EEX51415.1
Hypothetical protein.
       0.468
EEX50257.1
Putative flagellar protein FliS; COG: COG2373; Pfam: PF01835,PF07703; InterPro: IPR002890.
  
    0.465
EEX49684.1
Hypothetical protein; COG: COG3220; Pfam: PF05114; InterPro: IPR007801; Belongs to the UPF0276 family.
  
    0.411
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.