STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WzaPolysaccharide biosynthesis/export protein; COG: COG1596; Pfam: PF02563; InterPro: IPR003715. (393 aa)    
Predicted Functional Partners:
wzs
Chain length determinant protein; COG: COG3206; Pfam: PF02706; InterPro: IPR003856.
 
 
 0.999
wzb
Low molecular weight phosphotyrosine protein phosphatase; COG: COG0394; Pfam: PF01451; InterPro: IPR000106; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.905
pglB
Bacterial sugar transferase; COG: COG2148; Pfam: PF02397; InterPro: IPR003362.
 
  
 0.873
pglD
Polysaccharide biosynthesis protein; COG: COG1086; Pfam: PF02719; InterPro: IPR003869.
  
  
 0.774
cap5E
Polysaccharide biosynthesis protein; COG: COG1086; Pfam: PF02719,PF08485; InterPro: IPR003869.
  
  
 0.710
ompA
OmpA-like transmembrane domain protein; COG: COG2885; Pfam: PF01389,PF00691; InterPro: IPR000498; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
 0.659
cap5F
NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF01370; InterPro: IPR016040.
  
  
 0.654
wcgV
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
 
  
 0.642
LamB
LamB porin; COG: COG4580; Pfam: PF02264; InterPro: IPR003192.
  
  
  0.592
mrp
CobQ/CobB/MinD/ParA nucleotide binding domain protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.561
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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