STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX51182.1Hypothetical protein; InterPro: IPR016181. (347 aa)    
Predicted Functional Partners:
pglB
Bacterial sugar transferase; COG: COG2148; Pfam: PF02397; InterPro: IPR003362.
 
     0.865
SpeG
Acetyltransferase, GNAT family; COG: COG1670; Pfam: PF00583; InterPro: IPR016181.
       0.741
pglD
Polysaccharide biosynthesis protein; COG: COG1086; Pfam: PF02719; InterPro: IPR003869.
 
     0.735
cap5F
NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF01370; InterPro: IPR016040.
       0.712
cap5G
UDP-N-acetylglucosamine 2-epimerase; COG: COG0381; Pfam: PF02350; InterPro: IPR003331; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.711
pglC
DegT/DnrJ/EryC1/StrS aminotransferase family protein; COG: COG0399; Pfam: PF01041; InterPro: IPR000653; Belongs to the DegT/DnrJ/EryC1 family.
       0.705
wcgV
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
       0.687
cap5E
Polysaccharide biosynthesis protein; COG: COG1086; Pfam: PF02719,PF08485; InterPro: IPR003869.
       0.684
EEX51188.1
Glycosyltransferase, group 1 family protein; Pfam: PF00534; overlaps another CDS with the same product name.
       0.617
RfaG
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296; overlaps another CDS with the same product name.
       0.617
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.