STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX50919.1Acyltransferase; COG: COG0204; Pfam: PF01553; InterPro: IPR002123. (220 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase; COG: COG4589; Pfam: PF01148; InterPro: IPR000374; Belongs to the CDS family.
 
 
  0.988
YnbA
CDP-alcohol phosphatidyltransferase; COG: COG0558; Pfam: PF01066; InterPro: IPR000462.
 
 
 0.958
citT
TrkA C-terminal domain protein; COG: COG0471; Pfam: PF03600,PF02080; InterPro: IPR004680.
       0.768
mog
Molybdenum cofactor synthesis domain protein; COG: COG0521; Pfam: PF00994; InterPro: IPR001453.
       0.725
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
   0.662
TqsA
Hypothetical protein; COG: COG0628; Pfam: PF01594; InterPro: IPR002549.
       0.650
glnB
Nitrogen regulatory protein P-II; COG: COG0347; Pfam: PF00543; InterPro: IPR015867; Belongs to the P(II) protein family.
       0.649
lpxB
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
    0.644
cdsA-2
Phosphatidate cytidylyltransferase; COG: COG0575; Pfam: PF01148; InterPro: IPR000374; Belongs to the CDS family.
    
 0.632
EEX50257.1
Putative flagellar protein FliS; COG: COG2373; Pfam: PF01835,PF07703; InterPro: IPR002890.
  
    0.584
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.