STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YnbACDP-alcohol phosphatidyltransferase; COG: COG0558; Pfam: PF01066; InterPro: IPR000462. (223 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase; COG: COG4589; Pfam: PF01148; InterPro: IPR000374; Belongs to the CDS family.
 
 
  0.997
EEX50919.1
Acyltransferase; COG: COG0204; Pfam: PF01553; InterPro: IPR002123.
 
 
 0.958
pdpB
PAP2 family protein; COG: COG0671; Pfam: PF01569; InterPro: IPR000326.
 
 
 0.936
cdsA-2
Phosphatidate cytidylyltransferase; COG: COG0575; Pfam: PF01148; InterPro: IPR000374; Belongs to the CDS family.
    
 0.930
pgpA
Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
    
 0.913
pssA
Phospholipase D domain protein; COG: COG1502; Pfam: PF00614.
    
 0.911
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG: COG0558; Pfam: PF01066; InterPro: IPR004570; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
citT
TrkA C-terminal domain protein; COG: COG0471; Pfam: PF03600,PF02080; InterPro: IPR004680.
 
    0.803
mog
Molybdenum cofactor synthesis domain protein; COG: COG0521; Pfam: PF00994; InterPro: IPR001453.
       0.723
EEX50911.1
Hypothetical protein; COG: COG1426.
  
    0.704
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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