STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TusBPutative sulfur relay protein TusB/DsrH. (80 aa)    
Predicted Functional Partners:
tusC
Sulfur relay protein TusC/DsrF; COG: COG2923; Pfam: PF02635; InterPro: IPR003787; Belongs to the DsrF/TusC family.
  
 0.998
tusD
Sulfur relay protein TusD/DsrE; COG: COG1553; Pfam: PF02635; InterPro: IPR003787.
  
 
 0.986
YchN
DsrE/DsrF-like family protein; COG: COG1553; Pfam: PF02635; InterPro: IPR003787.
  
 
 0.758
tusE
Sulfur relay protein, TusE/DsrC/DsvC family; COG: COG2920; Pfam: PF04358; InterPro: IPR007453.
  
 
 0.660
EEX50697.1
YheO-like protein; COG: COG2964; Pfam: PF08348; InterPro: IPR013559.
       0.643
rpsL
Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
       0.494
fkpB
Peptidyl-prolyl cis-trans isomerase, FKBP-type; COG: COG0545; Pfam: PF01346,PF00254; InterPro: IPR000774.
       0.456
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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