STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tusCSulfur relay protein TusC/DsrF; COG: COG2923; Pfam: PF02635; InterPro: IPR003787; Belongs to the DsrF/TusC family. (120 aa)    
Predicted Functional Partners:
tusD
Sulfur relay protein TusD/DsrE; COG: COG1553; Pfam: PF02635; InterPro: IPR003787.
 
 0.999
TusB
Putative sulfur relay protein TusB/DsrH.
  
 0.998
YchN
DsrE/DsrF-like family protein; COG: COG1553; Pfam: PF02635; InterPro: IPR003787.
 
 
 0.826
tusE
Sulfur relay protein, TusE/DsrC/DsvC family; COG: COG2920; Pfam: PF04358; InterPro: IPR007453.
 
  
 0.809
EEX50697.1
YheO-like protein; COG: COG2964; Pfam: PF08348; InterPro: IPR013559.
  
    0.800
fkpB
Peptidyl-prolyl cis-trans isomerase, FKBP-type; COG: COG0545; Pfam: PF01346,PF00254; InterPro: IPR000774.
       0.569
sprT
Metallopeptidase, SprT family; COG: COG3091; Pfam: PF03926; InterPro: IPR006640; Belongs to the SprT family.
  
     0.562
EEX51377.1
Putative ACR, COG1399; COG: COG1399; Pfam: PF02620; InterPro: IPR003772.
  
     0.507
rdgC
Putative recombination associated protein; May be involved in recombination; Belongs to the RdgC family.
  
     0.465
slyX
SlyX family protein; COG: COG2900; Pfam: PF04102; InterPro: IPR007236; Belongs to the SlyX family.
       0.462
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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