STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX50697.1YheO-like protein; COG: COG2964; Pfam: PF08348; InterPro: IPR013559. (224 aa)    
Predicted Functional Partners:
tusD
Sulfur relay protein TusD/DsrE; COG: COG1553; Pfam: PF02635; InterPro: IPR003787.
  
    0.806
tusC
Sulfur relay protein TusC/DsrF; COG: COG2923; Pfam: PF02635; InterPro: IPR003787; Belongs to the DsrF/TusC family.
  
    0.800
yfbU
YfbU domain protein; COG: COG3013; Pfam: PF03887; InterPro: IPR005587; Belongs to the UPF0304 family.
  
     0.676
TusB
Putative sulfur relay protein TusB/DsrH.
       0.643
YecM
YecM protein; COG: COG3102; Pfam: PF06185; InterPro: IPR010393.
  
     0.624
fkpB
Peptidyl-prolyl cis-trans isomerase, FKBP-type; COG: COG0545; Pfam: PF01346,PF00254; InterPro: IPR000774.
       0.569
tex
ASCH domain protein; COG: COG3097; Pfam: PF06164; InterPro: IPR008314; Belongs to the UPF0267 family.
  
     0.556
EEX49916.1
Hypothetical protein; COG: COG3099; Pfam: PF04269; InterPro: IPR007376; Belongs to the UPF0263 family.
  
     0.538
EEX50317.1
Hypothetical protein; COG: COG3112; Pfam: PF06062; InterPro: IPR008249; Belongs to the UPF0231 family.
  
     0.536
EEX50757.1
Hypothetical protein; COG: COG3171; Pfam: PF04320; InterPro: IPR007416.
  
     0.518
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.