STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC2Branched-chain amino acid ABC transporter, permease protein; COG: COG1172; Pfam: PF02653; InterPro: IPR001851; Belongs to the binding-protein-dependent transport system permease family. (342 aa)    
Predicted Functional Partners:
MglA_2
ABC transporter, ATP-binding protein; COG: COG1129; Pfam: PF00005; InterPro: IPR003439.
  0.993
rbsA
ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.972
rbsB2
Sugar-binding domain protein; COG: COG1879; Pfam: PF00532.
   0.971
mglA2
ABC transporter, ATP-binding protein; COG: COG1129; Pfam: PF00005; InterPro: IPR003439.
  0.970
rbsA3
ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.970
rbsA2
ABC transporter, ATP-binding protein; COG: COG1129; Pfam: PF00005; InterPro: IPR003439.
  
  0.945
rbsB
Sugar-binding domain protein; COG: COG1879; Pfam: PF00532.
   0.867
rbsB3
Sugar-binding domain protein; COG: COG1879; Pfam: PF00532.
   0.864
mglA
ABC transporter, ATP-binding protein; COG: COG1129; Pfam: PF00005; InterPro: IPR003439.
   0.824
rbsB5
Sugar-binding domain protein; COG: COG1879; Pfam: PF00532.
   0.824
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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