STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czcDPutative cadmium, cobalt and zinc/H(+)-K(+) antiporter; COG: COG1230; Pfam: PF01545; InterPro: IPR002524. (200 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
    0.601
EEX50718.1
Hypothetical protein.
       0.520
fabF
Beta-ketoacyl synthase, C-terminal domain protein; COG: COG0304; Pfam: PF00109,PF02801; InterPro: IPR000794; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.520
EEX50720.1
Hypothetical protein; COG: COG4706.
       0.520
fabG-2
Putative 3-oxoacyl-(acyl-carrier-protein) reductase; COG: COG1028; Pfam: PF00106; InterPro: IPR016040.
       0.520
fabF2
3-oxoacyl-(acyl carrier protein) synthase II; COG: COG0304; Pfam: PF00109,PF02801; InterPro: IPR000794; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.481
EEX50723.1
Hypothetical protein.
       0.472
EEX50730.1
FabA-like domain protein; Pfam: PF07977.
       0.452
EEX50725.1
Acyltransferase; COG: COG0204; Pfam: PF01553; InterPro: IPR002123.
       0.450
EEX50724.1
Hypothetical protein.
       0.441
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.