STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptsGPTS system, glucose-like IIB component; COG: COG1263; Pfam: PF02378,PF00367; InterPro: IPR003352. (503 aa)    
Predicted Functional Partners:
ptbA
PTS system, glucose subfamily, IIA component; COG: COG2190; Pfam: PF00358; InterPro: IPR001127.
 0.999
ptsH
Phosphocarrier, HPr family; COG: COG1925; Pfam: PF00381; InterPro: IPR000032.
  
 
 0.939
pgi
Glucose-6-phosphate isomerase; COG: COG0166; Pfam: PF00342; InterPro: IPR001672; Belongs to the GPI family.
    
 0.930
YeaD_1
Aldose 1-epimerase; COG: COG0676; Pfam: PF01263; InterPro: IPR014718; Belongs to the glucose-6-phosphate 1-epimerase family.
     
  0.900
YeaD_2
Aldose 1-epimerase; COG: COG0676; Pfam: PF01263; InterPro: IPR014718; Belongs to the glucose-6-phosphate 1-epimerase family.
     
  0.900
tkt
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 
 0.867
zwf
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.861
fbaA
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
   
 
 0.833
fba
Ketose-bisphosphate aldolase; COG: COG0191; Pfam: PF01116; InterPro: IPR013785.
   
 
 0.833
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
   
 
 0.828
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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