Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX50510.1 | EntS | HMPREF0621_0898 | HMPREF0621_0896 | XapX domain protein; Pfam: PF07235; InterPro: IPR009872. | Hypothetical protein; COG: COG0477; Pfam: PF05977; InterPro: IPR010290. | 0.878 |
EEX50510.1 | NfdA | HMPREF0621_0898 | HMPREF0621_0897 | XapX domain protein; Pfam: PF07235; InterPro: IPR009872. | Amidohydrolase family protein; COG: COG1574; Pfam: PF07969; InterPro: IPR013108. | 0.951 |
EEX50510.1 | YcaC | HMPREF0621_0898 | HMPREF0621_0899 | XapX domain protein; Pfam: PF07235; InterPro: IPR009872. | Isochorismatase family protein; COG: COG1335; Pfam: PF00857; InterPro: IPR000868. | 0.934 |
EntS | EEX50510.1 | HMPREF0621_0896 | HMPREF0621_0898 | Hypothetical protein; COG: COG0477; Pfam: PF05977; InterPro: IPR010290. | XapX domain protein; Pfam: PF07235; InterPro: IPR009872. | 0.878 |
EntS | NfdA | HMPREF0621_0896 | HMPREF0621_0897 | Hypothetical protein; COG: COG0477; Pfam: PF05977; InterPro: IPR010290. | Amidohydrolase family protein; COG: COG1574; Pfam: PF07969; InterPro: IPR013108. | 0.888 |
EntS | YcaC | HMPREF0621_0896 | HMPREF0621_0899 | Hypothetical protein; COG: COG0477; Pfam: PF05977; InterPro: IPR010290. | Isochorismatase family protein; COG: COG1335; Pfam: PF00857; InterPro: IPR000868. | 0.859 |
FxsA | NfdA | HMPREF0621_0549 | HMPREF0621_0897 | Putative UPF0716 protein FxsA; Pfam: PF04186; InterPro: IPR007313. | Amidohydrolase family protein; COG: COG1574; Pfam: PF07969; InterPro: IPR013108. | 0.545 |
NfdA | EEX50510.1 | HMPREF0621_0897 | HMPREF0621_0898 | Amidohydrolase family protein; COG: COG1574; Pfam: PF07969; InterPro: IPR013108. | XapX domain protein; Pfam: PF07235; InterPro: IPR009872. | 0.951 |
NfdA | EntS | HMPREF0621_0897 | HMPREF0621_0896 | Amidohydrolase family protein; COG: COG1574; Pfam: PF07969; InterPro: IPR013108. | Hypothetical protein; COG: COG0477; Pfam: PF05977; InterPro: IPR010290. | 0.888 |
NfdA | FxsA | HMPREF0621_0897 | HMPREF0621_0549 | Amidohydrolase family protein; COG: COG1574; Pfam: PF07969; InterPro: IPR013108. | Putative UPF0716 protein FxsA; Pfam: PF04186; InterPro: IPR007313. | 0.545 |
NfdA | YcaC | HMPREF0621_0897 | HMPREF0621_0899 | Amidohydrolase family protein; COG: COG1574; Pfam: PF07969; InterPro: IPR013108. | Isochorismatase family protein; COG: COG1335; Pfam: PF00857; InterPro: IPR000868. | 0.933 |
YcaC | EEX50510.1 | HMPREF0621_0899 | HMPREF0621_0898 | Isochorismatase family protein; COG: COG1335; Pfam: PF00857; InterPro: IPR000868. | XapX domain protein; Pfam: PF07235; InterPro: IPR009872. | 0.934 |
YcaC | EntS | HMPREF0621_0899 | HMPREF0621_0896 | Isochorismatase family protein; COG: COG1335; Pfam: PF00857; InterPro: IPR000868. | Hypothetical protein; COG: COG0477; Pfam: PF05977; InterPro: IPR010290. | 0.859 |
YcaC | NfdA | HMPREF0621_0899 | HMPREF0621_0897 | Isochorismatase family protein; COG: COG1335; Pfam: PF00857; InterPro: IPR000868. | Amidohydrolase family protein; COG: COG1574; Pfam: PF07969; InterPro: IPR013108. | 0.933 |