STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PfhRTonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; Pfam: PF07715,PF00593; InterPro: IPR011276. (759 aa)    
Predicted Functional Partners:
HmuT
Periplasmic binding protein; COG: COG4558; Pfam: PF01497; InterPro: IPR002491.
 
  
 0.801
btuC
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.735
tonB2
TonB-dependent receptor; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.705
fecE
ABC transporter, ATP-binding protein; COG: COG1120; Pfam: PF00005; InterPro: IPR003593.
 
  
 0.683
EEX50334.1
Phospholipase/carboxylesterase; Pfam: PF02230.
       0.548
hutZ
Pyridoxamine 5'-phosphate oxidase family protein; COG: COG0748; Pfam: PF01243; InterPro: IPR012349.
 
  
 0.545
EEX50784.1
TonB-dependent receptor; COG: COG1629; Pfam: PF07715,PF00593; InterPro: IPR000531.
  
    0.536
EEX49801.1
Hypothetical protein; COG: COG3721; Pfam: PF06228; InterPro: IPR010413.
 
  
 0.525
EEX50555.1
Hypothetical protein.
    
 
 0.518
EEX49574.1
Hypothetical protein.
    
 
 0.518
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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