STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaABNADH-ubiquinone/plastoquinone (complex I) family protein; COG: COG1009; Pfam: PF00361; InterPro: IPR001750. (480 aa)    
Predicted Functional Partners:
hycF
4Fe-4S binding domain protein; COG: COG1143; Pfam: PF00037.
 
 
 0.996
hyfG
Respiratory-chain NADH dehydrogenase, 30 Kd subunit; COG: COG3261; Pfam: PF00329,PF00374,PF00346; InterPro: IPR001135.
 
 
 0.989
hyfB
Hydrogenase 4 subunit B; COG: COG0651; Pfam: PF00361; InterPro: IPR001750.
 
 
0.982
hyfF
Hydrogenase 4 subunit F; COG: COG0651; Pfam: PF00361; InterPro: IPR001750.
 
 
0.979
hyfC
NADH dehydrogenase; COG: COG0650; Pfam: PF00146; InterPro: IPR001694.
 
   
 0.953
hyfE
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; COG: COG4237; Pfam: PF00420.
 
   
 0.947
hyfI
NADH ubiquinone oxidoreductase, 20 Kd subunit; COG: COG3260; Pfam: PF01058; InterPro: IPR014406.
 
  
 0.941
hycH
Formate hydrogenlyase maturation protein HycH; Pfam: PF07450; InterPro: IPR010005.
 
   
 0.907
hycI
Hydrogenase maturation peptidase HycI; COG: COG0680; Pfam: PF01750; InterPro: IPR004420.
 
   
 0.879
napG
Putative ferredoxin-type protein NapF; COG: COG1145; Pfam: PF00037; InterPro: IPR004494.
  
 
 0.858
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.