STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galEUDP-glucose 4-epimerase; COG: COG1087; Pfam: PF01370; InterPro: IPR005886; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (338 aa)    
Predicted Functional Partners:
galT
UTP--hexose-1-phosphate uridylyltransferase; COG: COG1085; Pfam: PF01087,PF02744; InterPro: IPR001937.
  
 0.994
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.953
galU
UTP--glucose-1-phosphate uridylyltransferase; COG: COG1210; Pfam: PF00483; InterPro: IPR005835.
 
  
 0.946
ugd
Nucleotide sugar dehydrogenase; COG: COG1004; Pfam: PF03721,PF00984,PF03720; InterPro: IPR014028.
  
 
 0.935
galM
Galactose mutarotase; Converts alpha-aldose to the beta-anomer.
 
  
 0.857
ampG
AmpG-related permease; COG: COG0477; Pfam: PF07690; InterPro: IPR011701.
     
 0.779
wzs
Chain length determinant protein; COG: COG3206; Pfam: PF02706; InterPro: IPR003856.
 
   
 0.513
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
 0.489
cap5F
NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF01370; InterPro: IPR016040.
  
 
 0.486
arcB
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00512,PF02518,PF00072,PF01627; InterPro: IPR003594.
   
 
 0.459
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.