STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MleNNa+/H+ antiporter family protein; COG: COG1757; Pfam: PF03553; InterPro: IPR004770. (507 aa)    
Predicted Functional Partners:
EEX49958.1
Hypothetical protein; COG: COG5595.
  
     0.476
EEX50839.1
Na+/H+ antiporter family protein; COG: COG2056; Pfam: PF03553; InterPro: IPR004770.
  
   
 0.454
panF
Sodium/pantothenate symporter; COG: COG4145; Pfam: PF00474; InterPro: IPR011849; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.449
EEX50124.1
Sodium:neurotransmitter symporter family protein; COG: COG0733; Pfam: PF00209; InterPro: IPR000175; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
     0.439
EEX50178.1
Sodium:neurotransmitter symporter family protein; COG: COG0733; Pfam: PF00209; InterPro: IPR000175; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
     0.431
ilvN
Acetolactate synthase, small subunit; COG: COG0440; Pfam: PF01842; InterPro: IPR004789; overlaps another CDS with the same product name.
       0.425
ilvB-2
Acetolactate synthase, large subunit, biosynthetic type; COG: COG0028; Pfam: PF02776,PF00205,PF02775; InterPro: IPR012846; overlaps another CDS with the same product name.
       0.406
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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