STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydCThiol reductant ABC exporter, CydC subunit; COG: COG4987; Pfam: PF00005; InterPro: IPR014223. (575 aa)    
Predicted Functional Partners:
cydD
Thiol reductant ABC exporter, CydD subunit; COG: COG4988; Pfam: PF00664,PF00005; InterPro: IPR014216.
 
 
0.995
cydB
Cytochrome d ubiquinol oxidase, subunit II; COG: COG1294; Pfam: PF02322; InterPro: IPR003317.
 
  
 0.906
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
     
0.865
cydA
Bacterial cytochrome ubiquinol oxidase; COG: COG1271; Pfam: PF01654; InterPro: IPR002585.
 
  
 0.863
CydD_2
ABC transporter, ATP-binding protein; COG: COG4988; Pfam: PF00664,PF00005; InterPro: IPR003593.
 
  
0.777
oppF
ABC transporter, ATP-binding protein; COG: COG4608; Pfam: PF00005,PF08352; InterPro: IPR003593.
 
    
0.738
trxB
Thioredoxin-disulfide reductase; COG: COG0492; Pfam: PF07992,PF00070; InterPro: IPR005982.
       0.567
tesB
acyl-CoA thioesterase II; COG: COG1946; Pfam: PF02551; InterPro: IPR003703.
       0.408
EEX49641.1
Thioredoxin; COG: COG3118; Pfam: PF00085; InterPro: IPR012335.
       0.405
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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