STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manXPTS system, mannose/fructose/sorbose family, IIB component; COG: COG3444; Pfam: PF03610,PF03830; InterPro: IPR004720. (327 aa)    
Predicted Functional Partners:
ptsH
Phosphocarrier, HPr family; COG: COG1925; Pfam: PF00381; InterPro: IPR000032.
  
 0.999
manZ
PTS system, mannose/fructose/sorbose family, IID component; COG: COG3716; Pfam: PF03613; InterPro: IPR004704.
 
 0.999
manY
PTS system, mannose/fructose/sorbose family, IIC component; COG: COG3715; Pfam: PF03609; InterPro: IPR004700.
 
 0.999
FruB
Hypothetical protein; 2.7.1.-.
 
 
 0.999
manA
Mannose-6-phosphate isomerase, class I; COG: COG1482; Pfam: PF01238; InterPro: IPR001250.
    
 0.958
yhxB
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; COG: COG1109; Pfam: PF02878,PF02879,PF02880,PF00408; InterPro: IPR016055.
    
 0.915
manB
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; COG: COG1109; Pfam: PF02878,PF02879,PF02880,PF00408; InterPro: IPR016055.
    
 0.915
nagC2
ROK family protein; COG: COG1940; Pfam: PF00480; InterPro: IPR000600.
    
 0.863
scrK
Kinase, PfkB family; COG: COG0524; Pfam: PF00294; InterPro: IPR011611; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.839
YobD
Hypothetical protein; COG: COG4811; Pfam: PF06173; InterPro: IPR009328.
 
    0.760
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.