STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX49806.1Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296. (407 aa)    
Predicted Functional Partners:
EEX49807.1
Hypothetical protein; COG: COG4671.
 
     0.922
EEX49803.1
Hypothetical protein.
 
     0.864
MsbA_2
ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR001140.
 
   0.822
cap5F
NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF01370; InterPro: IPR016040.
  
  
 0.770
icsA
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
 
    
0.718
ugd
Nucleotide sugar dehydrogenase; COG: COG1004; Pfam: PF03721,PF00984,PF03720; InterPro: IPR014028.
  
  
 0.633
malQ-2
4-alpha-glucanotransferase; COG: COG1640; Pfam: PF02446; InterPro: IPR003385.
  
 0.599
wzs
Chain length determinant protein; COG: COG3206; Pfam: PF02706; InterPro: IPR003856.
 
  
 0.549
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.482
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.473
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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