STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hup2TonB-dependent receptor; COG: COG1629; Pfam: PF07715,PF00593; InterPro: IPR000531. (860 aa)    
Predicted Functional Partners:
tonB2
TonB-dependent receptor; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.786
TdhA
TonB-dependent siderophore receptor; Pfam: PF07715,PF00593; InterPro: IPR010105.
  
     0.630
EEX50244.1
TIGR01619 family protein; Pfam: PF05117,PF06877; InterPro: IPR006506.
  
     0.620
EEX49507.1
Ribonuclease, T2 family; COG: COG3719; Pfam: PF00445; InterPro: IPR001568; Belongs to the RNase T2 family.
  
     0.602
lgtB
acto-N-neotetraose biosynthesis glycosyltransferase LgtB; COG: COG3306; Pfam: PF01755; InterPro: IPR002654.
  
     0.599
oapA
Opacity-associated protein A; Pfam: PF08525,PF04225; InterPro: IPR007340.
  
     0.569
EEX50026.1
Hypothetical protein.
  
     0.555
EEX51137.1
4'-phosphopantetheinyl transferase family protein; Pfam: PF01648; Belongs to the P-Pant transferase superfamily.
  
     0.524
EEX50294.1
Hypothetical protein; COG: COG3774; Pfam: PF04488; InterPro: IPR007577.
  
     0.507
EEX50046.1
Hypothetical protein; COG: COG3683; Pfam: PF06226; InterPro: IPR010412.
  
     0.507
Your Current Organism:
Pasteurella dagmatis
NCBI taxonomy Id: 667128
Other names: P. dagmatis ATCC 43325, Pasteurella dagmatis ATCC 43325, Pasteurella dagmatis str. ATCC 43325, Pasteurella dagmatis strain ATCC 43325
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.