STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klcAAntirestriction protein; Pfam: PF03230; InterPro: IPR004914. (127 aa)    
Predicted Functional Partners:
EFE98072.1
Hypothetical protein.
     
 0.756
radC
DNA repair protein RadC; COG: COG2003; Pfam: PF04002; InterPro: IPR001405; Belongs to the UPF0758 family.
  
  
 0.727
NlpE
Hypothetical protein; COG: COG3015; Pfam: PF04170; InterPro: IPR007298.
  
     0.709
EFE93333.1
Hypothetical protein; Pfam: PF06067; InterPro: IPR009276.
 
  
 0.707
EFE94953.1
Hypothetical protein.
  
     0.685
EFE98306.1
Hypothetical protein.
  
     0.638
EFE93579.1
Hypothetical protein; COG: COG3593.
  
     0.609
CbtA
Hypothetical protein; Pfam: PF06755; InterPro: IPR009610.
  
  
 0.593
panZ
Hypothetical protein; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.
  
     0.590
flgM
Flagellar biosynthesis anti-sigma factor FlgM; COG: COG2747; Pfam: PF04316; InterPro: IPR007412.
  
     0.586
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.