STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
priCPrimosomal replication protein priB and priC; COG: COG3923; Pfam: PF07445; InterPro: IPR010890. (198 aa)    
Predicted Functional Partners:
EFE97922.1
Hypothetical protein.
  
     0.766
oapA
Opacity-associated protein A; COG: COG3061; Pfam: PF08525,PF04225; InterPro: IPR007340.
  
     0.757
ybgE
Cyd operon protein YbgE; COG: COG3790; InterPro: IPR011846.
  
     0.753
MlaB
STAS domain protein; COG: COG3113; Pfam: PF01740.
  
     0.741
wzzE
Chain length determinant protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.738
EFE95445.1
Hypothetical protein.
  
     0.731
cpxP
Periplasmic repressor CpxP; COG: COG3678; Pfam: PF07813.
  
     0.730
EFE97531.1
Mu DNA-binding domain protein; Pfam: PF02316; InterPro: IPR011991.
  
     0.726
zapC
Hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.705
atpI
ATP synthase F0, I subunit; COG: COG3312; Pfam: PF03899; InterPro: IPR005598.
  
     0.703
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.