STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysKPyridoxal-phosphate dependent protein; COG: COG0031; Pfam: PF00291; InterPro: IPR001926. (346 aa)    
Predicted Functional Partners:
cysE
Serine O-acetyltransferase; COG: COG1045; Pfam: PF06426,PF00132; InterPro: IPR005881.
  
 0.964
metC5
Cys/Met metabolism PLP-dependent enzyme; COG: COG0626; Pfam: PF01053; InterPro: IPR000277.
 
 0.953
metB
Cystathionine gamma-synthase; COG: COG0626; Pfam: PF01053; InterPro: IPR011821.
  
 0.945
cysJ
Sulfite reductase (NADPH) flavoprotein, alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family.
  
 
 0.942
metC
Putative methionine gamma-lyase; COG: COG0626; Pfam: PF01053; InterPro: IPR000277.
  
 0.942
metC-2
Cystathionine beta-lyase; COG: COG0626; Pfam: PF01053; InterPro: IPR006233.
  
 0.941
metC-3
Cystathionine beta-lyase; COG: COG0626; Pfam: PF01053; InterPro: IPR006233.
  
 0.941
cysI
Sulfite reductase (NADPH) hemoprotein, beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.939
cysK-2
Cysteine synthase A; COG: COG0031; Pfam: PF00291; InterPro: IPR001926; overlaps another CDS with the same product name.
  
  
  0.925
serC
Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
  
 
 0.913
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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