STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malZAlpha amylase, catalytic domain protein; COG: COG0366; Pfam: PF00128; InterPro: IPR013781; Belongs to the glycosyl hydrolase 13 family. (606 aa)    
Predicted Functional Partners:
malS
Periplasmic alpha-amylase; COG: COG0366; Pfam: PF00128; InterPro: IPR013781.
  
 
 
0.947
malQ
4-alpha-glucanotransferase; COG: COG1640; Pfam: PF02446; InterPro: IPR003385.
 
 
 0.939
scrK-2
Fructokinase; COG: COG0524; Pfam: PF00294; InterPro: IPR011611; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.923
bglX
Glycosyl hydrolase family 3 C-terminal domain protein; COG: COG1472; Pfam: PF00933,PF01915; InterPro: IPR002772; Belongs to the glycosyl hydrolase 3 family.
  
 
 0.920
melA2
Alpha-galactosidase; Pfam: PF02065; InterPro: IPR013785.
  
 
 0.914
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.909
cscA
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.909
YicI_1
Glycosyl hydrolase, family 31; COG: COG1501; Pfam: PF01055; InterPro: IPR000322; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.908
lsc
Levansucrase/Invertase; Pfam: PF02435; InterPro: IPR003469; Belongs to the glycosyl hydrolase 68 family.
  
 
 0.907
mak
ROK family protein; COG: COG1940; Pfam: PF00480; InterPro: IPR000600.
    
 0.904
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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