STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fitATonB-dependent siderophore receptor; COG: COG1629; Pfam: PF07715,PF00593; InterPro: IPR010105. (702 aa)    
Predicted Functional Partners:
entB
Isochorismatase; COG: COG1535; Pfam: PF00857,PF00550; InterPro: IPR000868.
   
  
 0.943
fecB
Periplasmic binding protein; COG: COG0614; Pfam: PF01497.
 
   
 0.765
entF
AMP-binding enzyme; COG: COG1020; Pfam: PF00668,PF00501,PF00550,PF00975; InterPro: IPR010071.
   
  
 0.630
fes
Putative esterase; COG: COG2382; Pfam: PF00756; InterPro: IPR000801.
   
  
 0.569
entE
(2,3-dihydroxybenzoyl)adenylate synthase; COG: COG1021; Pfam: PF00501; InterPro: IPR011963.
   
  
 0.566
EFE98216.1
Acetyltransferase, GNAT family; Pfam: PF00583; InterPro: IPR016181.
       0.547
tonB
TonB family domain protein.
 
 
 0.538
EFE98219.1
Acetyltransferase, GNAT family; Pfam: PF00583; InterPro: IPR000182.
       0.460
TonB
TonB-dependent receptor; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.451
fepA
TonB-dependent siderophore receptor; COG: COG4771; Pfam: PF07715,PF00593; InterPro: IPR010105.
   
  
 0.426
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.