STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setASugar efflux transporter; Pfam: PF07690; InterPro: IPR011701. (307 aa)    
Predicted Functional Partners:
EFE97952.1
Hypothetical protein.
     0.948
EFE95752.1
Hypothetical protein.
  
     0.628
YdgH_3
Hypothetical protein; Pfam: PF07338.
  
     0.590
LpoB
Hypothetical protein; COG: COG3417.
  
     0.565
sgrR
ABC transporter, substrate-binding protein, family 5; Activates the small RNA gene sgrS under glucose-phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding these molecules in its C-terminal solute-binding domain.
 
  
 0.491
aaeX
Hypothetical protein; Pfam: PF07869; InterPro: IPR012451.
  
   
 0.490
EFE97953.1
Hypothetical protein.
       0.485
YbhI
Transporter, DASS family; COG: COG0471; Pfam: PF00939; InterPro: IPR001898.
  
    0.484
mipA
MltA-interacting protein MipA; COG: COG3713; Pfam: PF06629; InterPro: IPR010583.
  
     0.481
EFE96807.1
Hypothetical protein.
  
     0.477
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.