rpsT protein (Serratia odorifera) - STRING interaction network

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Score

rpsT

Ribosomal protein S20; COG: COG0268; Pfam: PF01649; InterPro: IPR002583. (61 aa)

Predicted Functional Partners:

rplU

0.993

rpmB

0.993

rplM

0.993

rpmF

0.993

rpsU

0.991

rpsP

0.990

rpmA

0.990

rpmH

0.988

rpsI

0.987

rpmG

0.984

Your Current Organism:

Serratia odorifera

NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	HMPREF0758_1872	HMPREF0758_0820	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplM	rpmA	HMPREF0758_1872	HMPREF0758_0819	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L27; COG: COG0211; Pfam: PF01016; InterPro: IPR001684; Belongs to the bacterial ribosomal protein bL27 family.	0.996
rplM	rpmB	HMPREF0758_1872	HMPREF0758_1264	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383.	0.992
rplM	rpmF	HMPREF0758_1872	HMPREF0758_4191	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L32; COG: COG0333; Pfam: PF01783; InterPro: IPR002677; Belongs to the bacterial ribosomal protein bL32 family.	0.991
rplM	rpmG	HMPREF0758_1872	HMPREF0758_1263	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L33; COG: COG0267; Pfam: PF00471; InterPro: IPR001705; Belongs to the bacterial ribosomal protein bL33 family.	0.992
rplM	rpmH	HMPREF0758_1872	HMPREF0758_1364	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L34; Pfam: PF00468; InterPro: IPR000271.	0.980
rplM	rpsI	HMPREF0758_1872	HMPREF0758_1873	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S9; COG: COG0103; Pfam: PF00380; InterPro: IPR000754; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsP	HMPREF0758_1872	HMPREF0758_0414	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S16; COG: COG0228; Pfam: PF00886; InterPro: IPR000307; Belongs to the bacterial ribosomal protein bS16 family.	0.993
rplM	rpsT	HMPREF0758_1872	HMPREF0758_0577	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; COG: COG0268; Pfam: PF01649; InterPro: IPR002583.	0.993
rplM	rpsU	HMPREF0758_1872	HMPREF0758_1931	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S21; COG: COG0828; Pfam: PF01165; InterPro: IPR001911; Belongs to the bacterial ribosomal protein bS21 family.	0.991
rplU	rplM	HMPREF0758_0820	HMPREF0758_1872	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.993
rplU	rpmA	HMPREF0758_0820	HMPREF0758_0819	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L27; COG: COG0211; Pfam: PF01016; InterPro: IPR001684; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplU	rpmB	HMPREF0758_0820	HMPREF0758_1264	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L28; COG: COG0227; Pfam: PF00830; InterPro: IPR001383.	0.993
rplU	rpmF	HMPREF0758_0820	HMPREF0758_4191	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L32; COG: COG0333; Pfam: PF01783; InterPro: IPR002677; Belongs to the bacterial ribosomal protein bL32 family.	0.993
rplU	rpmG	HMPREF0758_0820	HMPREF0758_1263	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L33; COG: COG0267; Pfam: PF00471; InterPro: IPR001705; Belongs to the bacterial ribosomal protein bL33 family.	0.993
rplU	rpmH	HMPREF0758_0820	HMPREF0758_1364	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L34; Pfam: PF00468; InterPro: IPR000271.	0.988
rplU	rpsI	HMPREF0758_0820	HMPREF0758_1873	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S9; COG: COG0103; Pfam: PF00380; InterPro: IPR000754; Belongs to the universal ribosomal protein uS9 family.	0.994
rplU	rpsP	HMPREF0758_0820	HMPREF0758_0414	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S16; COG: COG0228; Pfam: PF00886; InterPro: IPR000307; Belongs to the bacterial ribosomal protein bS16 family.	0.995
rplU	rpsT	HMPREF0758_0820	HMPREF0758_0577	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S20; COG: COG0268; Pfam: PF01649; InterPro: IPR002583.	0.993
rplU	rpsU	HMPREF0758_0820	HMPREF0758_1931	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S21; COG: COG0828; Pfam: PF01165; InterPro: IPR001911; Belongs to the bacterial ribosomal protein bS21 family.	0.991