STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnJPhosphonate metabolism protein PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (285 aa)    
Predicted Functional Partners:
phnI
Bacterial phosphonate metabolism protein PhnI; COG: COG3626; Pfam: PF05861; InterPro: IPR008773.
 
 0.999
phnG
Phosphonate C-P lyase system protein PhnG; COG: COG3624; Pfam: PF06754; InterPro: IPR009609.
 
 
 0.998
phnH
Phosphonate C-P lyase system protein PhnH; COG: COG3625; Pfam: PF05845; InterPro: IPR008772.
 
 
 0.997
phnK
Phosphonate C-P lyase system protein PhnK; COG: COG4107; Pfam: PF00005,PF08352; InterPro: IPR012700.
 
 0.997
phnM
Phosphonate metabolism protein PhnM; COG: COG3454; Pfam: PF07969; InterPro: IPR012696.
 
 
 0.997
phnL
Phosphonate C-P lyase system protein PhnL; COG: COG4778; Pfam: PF00005; InterPro: IPR012701.
 
 
 0.995
phnF
Phosphonate metabolism transcriptional regulator PhnF; COG: COG2188; Pfam: PF00392,PF07702; InterPro: IPR012702.
 
  
 0.986
phnN
Phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
 0.978
phnP
Phosphonate metabolism protein PhnP; COG: COG1235; Pfam: PF00753.
 
 
 0.975
phnD
Phosphonate ABC transporter, periplasmic phosphonate binding protein; COG: COG3221; InterPro: IPR005770.
 
  
 0.965
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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