Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFE97498.1 | EFE97499.1 | HMPREF0758_0789 | HMPREF0758_0790 | Hypothetical protein. | Hypothetical protein; COG: COG0826. | 0.572 |
EFE97498.1 | yhbS | HMPREF0758_0789 | HMPREF0758_0787 | Hypothetical protein. | Acetyltransferase, GNAT family; COG: COG3153; Pfam: PF00583; InterPro: IPR000182. | 0.523 |
EFE97498.1 | yhbT | HMPREF0758_0789 | HMPREF0758_0788 | Hypothetical protein. | SCP-2 sterol transfer family protein; COG: COG3154; Pfam: PF02036; InterPro: IPR003033. | 0.523 |
EFE97499.1 | EFE97498.1 | HMPREF0758_0790 | HMPREF0758_0789 | Hypothetical protein; COG: COG0826. | Hypothetical protein. | 0.572 |
EFE97499.1 | yhbS | HMPREF0758_0790 | HMPREF0758_0787 | Hypothetical protein; COG: COG0826. | Acetyltransferase, GNAT family; COG: COG3153; Pfam: PF00583; InterPro: IPR000182. | 0.401 |
EFE97499.1 | yhbT | HMPREF0758_0790 | HMPREF0758_0788 | Hypothetical protein; COG: COG0826. | SCP-2 sterol transfer family protein; COG: COG3154; Pfam: PF02036; InterPro: IPR003033. | 0.908 |
YjaB | yhbS | HMPREF0758_4734 | HMPREF0758_0787 | Toxin-antitoxin system, toxin component, GNAT family; COG: COG0454; Pfam: PF00583; InterPro: IPR016181. | Acetyltransferase, GNAT family; COG: COG3153; Pfam: PF00583; InterPro: IPR000182. | 0.461 |
yhbS | EFE97498.1 | HMPREF0758_0787 | HMPREF0758_0789 | Acetyltransferase, GNAT family; COG: COG3153; Pfam: PF00583; InterPro: IPR000182. | Hypothetical protein. | 0.523 |
yhbS | EFE97499.1 | HMPREF0758_0787 | HMPREF0758_0790 | Acetyltransferase, GNAT family; COG: COG3153; Pfam: PF00583; InterPro: IPR000182. | Hypothetical protein; COG: COG0826. | 0.401 |
yhbS | YjaB | HMPREF0758_0787 | HMPREF0758_4734 | Acetyltransferase, GNAT family; COG: COG3153; Pfam: PF00583; InterPro: IPR000182. | Toxin-antitoxin system, toxin component, GNAT family; COG: COG0454; Pfam: PF00583; InterPro: IPR016181. | 0.461 |
yhbS | yhbT | HMPREF0758_0787 | HMPREF0758_0788 | Acetyltransferase, GNAT family; COG: COG3153; Pfam: PF00583; InterPro: IPR000182. | SCP-2 sterol transfer family protein; COG: COG3154; Pfam: PF02036; InterPro: IPR003033. | 0.898 |
yhbT | EFE97498.1 | HMPREF0758_0788 | HMPREF0758_0789 | SCP-2 sterol transfer family protein; COG: COG3154; Pfam: PF02036; InterPro: IPR003033. | Hypothetical protein. | 0.523 |
yhbT | EFE97499.1 | HMPREF0758_0788 | HMPREF0758_0790 | SCP-2 sterol transfer family protein; COG: COG3154; Pfam: PF02036; InterPro: IPR003033. | Hypothetical protein; COG: COG0826. | 0.908 |
yhbT | yhbS | HMPREF0758_0788 | HMPREF0758_0787 | SCP-2 sterol transfer family protein; COG: COG3154; Pfam: PF02036; InterPro: IPR003033. | Acetyltransferase, GNAT family; COG: COG3153; Pfam: PF00583; InterPro: IPR000182. | 0.898 |