STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE97561.1Phospholipase/carboxylesterase; COG: COG1073; Pfam: PF02230. (250 aa)    
Predicted Functional Partners:
EFE97088.1
Hypothetical protein; Pfam: PF07305; InterPro: IPR009918.
  
     0.566
EFE97562.1
Hypothetical protein; Pfam: PF07338.
       0.553
mviM2
Oxidoreductase, NAD-binding domain protein; COG: COG0673; Pfam: PF01408,PF02894; InterPro: IPR016040.
  
 
   0.488
EFE97193.1
AsmA family protein; Pfam: PF05170; InterPro: IPR007844.
 
    0.484
YobD
Hypothetical protein; COG: COG4811; Pfam: PF06173; InterPro: IPR009328.
  
     0.464
EFE93607.1
Hypothetical protein.
  
     0.453
EFE94277.1
Hypothetical protein.
  
     0.444
TomB
Hypothetical protein.
  
     0.438
dapX
NlpB/DapX lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.427
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.