STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdhCDP-diacylglycerol diphosphatase; COG: COG2134; Pfam: PF02611; InterPro: IPR003763. (282 aa)    
Predicted Functional Partners:
dgkA
Prokaryotic diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
  0.900
plsC
Acyltransferase; COG: COG0204; Pfam: PF01553; InterPro: IPR004552; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
  0.900
cdsA
Phosphatidate cytidylyltransferase; COG: COG0575; Pfam: PF01148; InterPro: IPR000374; Belongs to the CDS family.
     
  0.900
pssA
Phospholipase D domain protein; COG: COG1502; Pfam: PF00614.
     
  0.900
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
yhjE
MFS transporter, metabolite:H+ symporter (MHS) family protein; COG: COG0477; Pfam: PF00083; InterPro: IPR005828.
       0.714
EFE95752.1
Hypothetical protein.
  
     0.643
EFE97952.1
Hypothetical protein.
  
    0.632
EFE94760.1
Trypsin; COG: COG3591; Pfam: PF00089.
  
     0.556
osmB-2
Osmotically-inducible lipoprotein B.
  
     0.532
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.