STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE97100.1Phage tail tape measure protein, TP901 family; COG: COG5283; InterPro: IPR010090. (1055 aa)    
Predicted Functional Partners:
EFE97101.1
Phage P2 GpU; COG: COG3499; Pfam: PF06995; InterPro: IPR009734.
 
    0.961
EFE97099.1
Phage tail protein E; Pfam: PF06158; InterPro: IPR009322.
 
    0.920
fii
Phage major tail tube protein; COG: COG3498; Pfam: PF04985; InterPro: IPR006498.
 
  
 0.909
EFE97097.1
Phage tail sheath protein; COG: COG3497; Pfam: PF04984; InterPro: IPR007067.
 
  
 0.897
EFE97096.1
Phage late control gene D protein (GPD); COG: COG3500; Pfam: PF05954; InterPro: IPR010277.
 
  
 0.876
EFE97104.1
Phage tail protein I; COG: COG4385; InterPro: IPR006521.
 
  
 0.852
EFE97118.1
Phage capsid scaffolding protein GpO; Pfam: PF05929; InterPro: IPR009228.
 
    0.843
gpw
Putative lysozyme; COG: COG3628; Pfam: PF04965; InterPro: IPR007048.
 
    0.842
EFE97109.1
P2 phage tail completion protein R (GpR); Pfam: PF06891; InterPro: IPR009678.
 
    0.840
EFE97117.1
Phage major capsid protein, P2 family; Pfam: PF05125; InterPro: IPR006441.
 
    0.839
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.