STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE97103.1Phage tail fiber repeat protein; COG: COG5301; Pfam: PF03406,PF07484; InterPro: IPR011083. (501 aa)    
Predicted Functional Partners:
gpj
Baseplate J-like protein; COG: COG3948; Pfam: PF04865; InterPro: IPR006949.
 
    0.950
EFE97104.1
Phage tail protein I; COG: COG4385; InterPro: IPR006521.
 
    0.949
EFE97107.1
Phage-related baseplate assembly protein; COG: COG4540; Pfam: PF04717; InterPro: IPR013046.
 
    0.946
gpw
Putative lysozyme; COG: COG3628; Pfam: PF04965; InterPro: IPR007048.
 
    0.944
EFE97102.1
Caudovirales tail fiber assembly protein; Pfam: PF02413; InterPro: IPR003458.
 
     0.915
EFE97114.1
Phage Tail Protein X; Pfam: PF05489; InterPro: IPR008861.
 
    0.842
EFE97109.1
P2 phage tail completion protein R (GpR); Pfam: PF06891; InterPro: IPR009678.
 
     0.825
EFE97117.1
Phage major capsid protein, P2 family; Pfam: PF05125; InterPro: IPR006441.
 
     0.786
EFE97115.1
Phage head completion protein (GPL); Pfam: PF05926; InterPro: IPR009225.
 
     0.783
fii
Phage major tail tube protein; COG: COG3498; Pfam: PF04985; InterPro: IPR006498.
 
    0.776
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.