STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpwPutative lysozyme; COG: COG3628; Pfam: PF04965; InterPro: IPR007048. (121 aa)    
Predicted Functional Partners:
EFE97104.1
Phage tail protein I; COG: COG4385; InterPro: IPR006521.
 
 
 0.995
gpj
Baseplate J-like protein; COG: COG3948; Pfam: PF04865; InterPro: IPR006949.
 
 
 0.994
EFE97107.1
Phage-related baseplate assembly protein; COG: COG4540; Pfam: PF04717; InterPro: IPR013046.
 
 
 0.993
EFE97101.1
Phage P2 GpU; COG: COG3499; Pfam: PF06995; InterPro: IPR009734.
 
 
 0.992
EFE97109.1
P2 phage tail completion protein R (GpR); Pfam: PF06891; InterPro: IPR009678.
 
    0.990
EFE97114.1
Phage Tail Protein X; Pfam: PF05489; InterPro: IPR008861.
 
 
 0.989
EFE97115.1
Phage head completion protein (GPL); Pfam: PF05926; InterPro: IPR009225.
 
    0.989
EFE97117.1
Phage major capsid protein, P2 family; Pfam: PF05125; InterPro: IPR006441.
 
    0.986
EFE97118.1
Phage capsid scaffolding protein GpO; Pfam: PF05929; InterPro: IPR009228.
 
    0.986
EFE97096.1
Phage late control gene D protein (GPD); COG: COG3500; Pfam: PF05954; InterPro: IPR010277.
 
 
 0.985
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.