STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recEExonuclease; Pfam: PF00929. (192 aa)    
Predicted Functional Partners:
EFE97128.1
Phosphoadenosine phosphosulfate reductase family protein; Pfam: PF01507; InterPro: IPR002500.
       0.773
dam-2
DNA adenine methylase; COG: COG0338; Pfam: PF02086; InterPro: IPR012326.
       0.773
LamB_2
Hypothetical protein; Pfam: PF02264; InterPro: IPR003192.
  
     0.741
wcaG
NAD-binding protein; COG: COG0451; Pfam: PF07993; InterPro: IPR016040.
  
     0.665
cybC
Soluble cytochrome b562; COG: COG3783; Pfam: PF07361; InterPro: IPR009155.
  
     0.657
EFE94462.1
Hypothetical protein.
  
     0.638
EFE95088.1
Hypothetical protein.
  
     0.607
EFE93617.1
Hypothetical protein.
  
     0.604
EFE95872.1
Hypothetical protein.
  
     0.476
EFE94005.1
Hypothetical protein.
  
     0.475
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.