STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysESerine O-acetyltransferase; COG: COG1045; Pfam: PF06426,PF00132; InterPro: IPR005881. (273 aa)    
Predicted Functional Partners:
cysK-2
Cysteine synthase A; COG: COG0031; Pfam: PF00291; InterPro: IPR001926; overlaps another CDS with the same product name.
 
 0.984
cysM
Cysteine synthase B; COG: COG0031; Pfam: PF00291; InterPro: IPR005858; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.976
cysK
Pyridoxal-phosphate dependent protein; COG: COG0031; Pfam: PF00291; InterPro: IPR001926.
  
 0.964
cysS
cysteine--tRNA ligase; COG: COG0215; Pfam: PF01406,PF09190; InterPro: IPR002308; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.959
cysB2
Putative cystathionine beta-synthase; COG: COG0031; Pfam: PF00291,PF00571; InterPro: IPR001926.
 
 0.954
sdaA
L-serine ammonia-lyase; COG: COG1760; Pfam: PF03315,PF03313; InterPro: IPR004644; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.911
sdaA2
L-serine ammonia-lyase; COG: COG1760; Pfam: PF03315,PF03313; InterPro: IPR004644; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.911
metM2
Amino acid kinase family; COG: COG0527; Pfam: PF00696; InterPro: IPR001341.
 
  
 0.891
thrA
Homoserine dehydrogenase; COG: COG0527; Pfam: PF00696,PF01842,PF03447,PF00742; InterPro: IPR001341; In the C-terminal section; belongs to the homoserine dehydrogenase family.
    
 0.876
metC5
Cys/Met metabolism PLP-dependent enzyme; COG: COG0626; Pfam: PF01053; InterPro: IPR000277.
  
 
 0.858
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.