STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YihDHypothetical protein; COG: COG3084; Pfam: PF06288; InterPro: IPR009383. (89 aa)    
Predicted Functional Partners:
EFE97991.1
Hypothetical protein; COG: COG1073; Pfam: PF06500; InterPro: IPR010520; 3.1.-.-; Belongs to the UPF0255 family.
  
     0.756
YijD
Hypothetical protein; Pfam: PF07226; InterPro: IPR009867.
  
     0.724
YiiS
Hypothetical protein; COG: COG3691; Pfam: PF04175; InterPro: IPR005272.
  
     0.722
yafD
Endonuclease/exonuclease/phosphatase family protein; COG: COG3021; Pfam: PF03372; InterPro: IPR005135.
  
     0.719
yejM
Arylsulfatase; COG: COG3083; Pfam: PF00884; InterPro: IPR000917.
  
     0.658
yihI
Hypothetical protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.
  
     0.627
zapC
Hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.621
rdoA
Phosphotransferase enzyme family; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.
  
    0.616
EFE94076.1
Hypothetical protein; COG: COG3150; Pfam: PF05728; InterPro: IPR008886; Belongs to the UPF0227 family.
  
     0.616
EFE96174.1
Hypothetical protein; COG: COG3171; Pfam: PF04320; InterPro: IPR007416.
  
     0.613
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.