STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhjQCellulose synthase operon protein YhjQ; COG: COG1192; Pfam: PF06564; InterPro: IPR009504. (242 aa)    
Predicted Functional Partners:
bcsE
Cellulose biosynthesis protein BcsE.
 
 
 0.963
celA-2
Cellulose synthase catalytic subunit (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
 
  
 0.949
EFE96899.1
Hypothetical protein.
   
 
 0.927
BcsB
Bacterial cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
 
  
 0.926
bcsC
Tetratricopeptide repeat protein; COG: COG0457; Pfam: PF07719,PF00515,PF05420; InterPro: IPR011990.
 
   
 0.911
bcsZ
Glycosyl hydrolase family 8; COG: COG3405; Pfam: PF01270; InterPro: IPR012341; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
 
   
 0.902
yhjU
Cellulose synthase operon protein YhjU.
 
   
 0.899
parB
ParB-like protein; COG: COG1475; Pfam: PF02195,PF08775; InterPro: IPR004437.
  
 
 0.761
panZ
Hypothetical protein; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.
  
    0.718
parC2
ParB-like protein; COG: COG1475; Pfam: PF02195.
  
 
 0.638
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.