STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panZHypothetical protein; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family. (130 aa)    
Predicted Functional Partners:
EFE96740.1
Hypothetical protein.
       0.778
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
 
 
 
 0.761
EFE94953.1
Hypothetical protein.
  
     0.733
wzzE
Chain length determinant protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
 
    0.732
QseG
Hypothetical protein.
  
     0.724
yhjQ
Cellulose synthase operon protein YhjQ; COG: COG1192; Pfam: PF06564; InterPro: IPR009504.
  
    0.718
flgM
Flagellar biosynthesis anti-sigma factor FlgM; COG: COG2747; Pfam: PF04316; InterPro: IPR007412.
  
     0.702
yjdC
Transcriptional regulator, TetR family; Pfam: PF00440.
  
     0.696
TomB
Hypothetical protein.
  
     0.693
csiE
PRD domain protein; COG: COG3711; Pfam: PF00874; InterPro: IPR011608.
  
     0.691
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.