STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frwDPTS system, Fru family, IIB component; COG: COG1445; Pfam: PF02379; InterPro: IPR003353. (114 aa)    
Predicted Functional Partners:
frwC
Phosphotransferase system, EIIC; COG: COG1299; Pfam: PF02378; InterPro: IPR006327.
 
 
 0.987
fruB
Phosphocarrier, HPr family; COG: COG4668; Pfam: PF00359,PF00381; InterPro: IPR002178.
 
  
 0.957
ptsP
Phosphoenolpyruvate-protein phosphotransferase; COG: COG1080; Pfam: PF00381,PF05524,PF00391,PF02896,PF00359; InterPro: IPR006318.
 
  
 0.954
pfkB
1-phosphofructokinase; COG: COG1105; Pfam: PF00294; InterPro: IPR011611; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.932
dhaM
Dihydroxyacetone kinase, phosphotransfer subunit; COG: COG3412; Pfam: PF03610,PF00381,PF05524,PF00391; InterPro: IPR012844; Belongs to the PEP-utilizing enzyme family.
 
  
 0.860
mtlA
PTS system, mannitol-specific IIC component; COG: COG2213; Pfam: PF02378,PF02302,PF00359; InterPro: IPR004718.
 
  
 0.814
pflC
Radical SAM domain protein; COG: COG1180; Pfam: PF04055.
       0.715
ptsN
PTS IIA-like nitrogen-regulatory protein PtsN; COG: COG1762; Pfam: PF00359; InterPro: IPR002178.
 
  
 0.694
ptsP-3
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
  
 0.643
sgcA
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; COG: COG1762; Pfam: PF00359; InterPro: IPR002178.
 
  
 0.554
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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