STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE96663.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
lexA-2
LexA DNA binding domain protein; Pfam: PF01726; InterPro: IPR011991.
  
    0.778
EFE96665.1
Hypothetical protein.
       0.773
EFE96666.1
Hypothetical protein.
       0.773
EFE96667.1
Hypothetical protein.
       0.773
EFE96668.1
Hypothetical protein.
       0.773
EFE96669.1
Hypothetical protein.
       0.773
EFE96342.1
Site-specific recombinase, phage integrase family; Pfam: PF00589; InterPro: IPR002104.
  
     0.747
EFE96670.1
Hypothetical protein.
       0.499
EFE96671.1
Hypothetical protein.
       0.499
EFE96672.1
Hypothetical protein.
       0.499
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.