STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttg2AABC transporter, ATP-binding protein; COG: COG1127; Pfam: PF00005; InterPro: IPR003593. (267 aa)    
Predicted Functional Partners:
MlaE_1
Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453.
 
 0.999
MlaD
Hypothetical protein; COG: COG1463; Pfam: PF02470; InterPro: IPR003399.
 
 0.998
ttg2D
Toluene tolerance protein Ttg2D; COG: COG2854; Pfam: PF05494; InterPro: IPR008869.
 
 
 0.973
MlaB
STAS domain protein; COG: COG3113; Pfam: PF01740.
  
 0.970
EFE96429.1
Hypothetical protein.
       0.757
YrbG
K+-dependent Na+/Ca+ exchanger family protein; COG: COG0530; Pfam: PF01699; InterPro: IPR004481.
       0.565
yrbA
BolA-like protein; COG: COG5007; Pfam: PF01722; InterPro: IPR002634; Belongs to the BolA/IbaG family.
     
 0.524
nuoA
NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
    0.517
kdsD2
Sugar isomerase, KpsF/GutQ family; COG: COG0794; Pfam: PF01380,PF00571; InterPro: IPR004800.
       0.493
cysS
cysteine--tRNA ligase; COG: COG0215; Pfam: PF01406,PF09190; InterPro: IPR002308; Belongs to the class-I aminoacyl-tRNA synthetase family.
     0.451
Your Current Organism:
Serratia odorifera
NCBI taxonomy Id: 667129
Other names: S. odorifera DSM 4582, Serratia odorifera DSM 4582, Serratia odorifera str. DSM 4582, Serratia odorifera strain DSM 4582
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