Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFE96429.1 | MlaB | HMPREF0758_1858 | HMPREF0758_1863 | Hypothetical protein. | STAS domain protein; COG: COG3113; Pfam: PF01740. | 0.679 |
EFE96429.1 | MlaD | HMPREF0758_1858 | HMPREF0758_1861 | Hypothetical protein. | Hypothetical protein; COG: COG1463; Pfam: PF02470; InterPro: IPR003399. | 0.712 |
EFE96429.1 | MlaE_1 | HMPREF0758_1858 | HMPREF0758_1860 | Hypothetical protein. | Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453. | 0.712 |
EFE96429.1 | ttg2A | HMPREF0758_1858 | HMPREF0758_1859 | Hypothetical protein. | ABC transporter, ATP-binding protein; COG: COG1127; Pfam: PF00005; InterPro: IPR003593. | 0.757 |
EFE96429.1 | ttg2D | HMPREF0758_1858 | HMPREF0758_1862 | Hypothetical protein. | Toluene tolerance protein Ttg2D; COG: COG2854; Pfam: PF05494; InterPro: IPR008869. | 0.679 |
EFE96429.1 | yrbA | HMPREF0758_1858 | HMPREF0758_1864 | Hypothetical protein. | BolA-like protein; COG: COG5007; Pfam: PF01722; InterPro: IPR002634; Belongs to the BolA/IbaG family. | 0.433 |
MlaB | EFE96429.1 | HMPREF0758_1863 | HMPREF0758_1858 | STAS domain protein; COG: COG3113; Pfam: PF01740. | Hypothetical protein. | 0.679 |
MlaB | MlaD | HMPREF0758_1863 | HMPREF0758_1861 | STAS domain protein; COG: COG3113; Pfam: PF01740. | Hypothetical protein; COG: COG1463; Pfam: PF02470; InterPro: IPR003399. | 0.972 |
MlaB | MlaE_1 | HMPREF0758_1863 | HMPREF0758_1860 | STAS domain protein; COG: COG3113; Pfam: PF01740. | Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453. | 0.967 |
MlaB | lptC | HMPREF0758_1863 | HMPREF0758_1854 | STAS domain protein; COG: COG3113; Pfam: PF01740. | Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family. | 0.748 |
MlaB | ttg2A | HMPREF0758_1863 | HMPREF0758_1859 | STAS domain protein; COG: COG3113; Pfam: PF01740. | ABC transporter, ATP-binding protein; COG: COG1127; Pfam: PF00005; InterPro: IPR003593. | 0.970 |
MlaB | ttg2D | HMPREF0758_1863 | HMPREF0758_1862 | STAS domain protein; COG: COG3113; Pfam: PF01740. | Toluene tolerance protein Ttg2D; COG: COG2854; Pfam: PF05494; InterPro: IPR008869. | 0.987 |
MlaB | yrbA | HMPREF0758_1863 | HMPREF0758_1864 | STAS domain protein; COG: COG3113; Pfam: PF01740. | BolA-like protein; COG: COG5007; Pfam: PF01722; InterPro: IPR002634; Belongs to the BolA/IbaG family. | 0.532 |
MlaD | EFE96429.1 | HMPREF0758_1861 | HMPREF0758_1858 | Hypothetical protein; COG: COG1463; Pfam: PF02470; InterPro: IPR003399. | Hypothetical protein. | 0.712 |
MlaD | MlaB | HMPREF0758_1861 | HMPREF0758_1863 | Hypothetical protein; COG: COG1463; Pfam: PF02470; InterPro: IPR003399. | STAS domain protein; COG: COG3113; Pfam: PF01740. | 0.972 |
MlaD | MlaE_1 | HMPREF0758_1861 | HMPREF0758_1860 | Hypothetical protein; COG: COG1463; Pfam: PF02470; InterPro: IPR003399. | Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453. | 0.999 |
MlaD | ttg2A | HMPREF0758_1861 | HMPREF0758_1859 | Hypothetical protein; COG: COG1463; Pfam: PF02470; InterPro: IPR003399. | ABC transporter, ATP-binding protein; COG: COG1127; Pfam: PF00005; InterPro: IPR003593. | 0.998 |
MlaD | ttg2D | HMPREF0758_1861 | HMPREF0758_1862 | Hypothetical protein; COG: COG1463; Pfam: PF02470; InterPro: IPR003399. | Toluene tolerance protein Ttg2D; COG: COG2854; Pfam: PF05494; InterPro: IPR008869. | 0.996 |
MlaD | yrbA | HMPREF0758_1861 | HMPREF0758_1864 | Hypothetical protein; COG: COG1463; Pfam: PF02470; InterPro: IPR003399. | BolA-like protein; COG: COG5007; Pfam: PF01722; InterPro: IPR002634; Belongs to the BolA/IbaG family. | 0.557 |
MlaE_1 | EFE96429.1 | HMPREF0758_1860 | HMPREF0758_1858 | Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453. | Hypothetical protein. | 0.712 |
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